ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

Chromosome Search Result

Search by: Chr = chr2
SNP (count: 414)

Literature-origin SNPs (count: 27)

LD-proxies (count: 387)


CNV (count: 22)
ID Band Size Type Inheritance Related Genes
CNV_Elia[2010]_9 2p21 108003 Deletion (hemizygous) Maternal PLEKHH2 THADA
CNV_Elia[2010]_10 2p22.3 78091 Deletion (hemizygous) Paternal
CNV_Elia[2010]_11 2p16.1 150246 Duplication Maternal RTN4
CNV_Elia[2010]_12 2q24.3 48412 Deletion (hemizygous) Paternal
CNV_Elia[2010]_13 2p11.2 182565 Duplication Maternal IMMT MRPL35 POLR1A PTCD3 REEP1
CNV_Elia[2010]_14 2p12 109391 Deletion (hemizygous) Paternal CTNNA2
CNV_Elia[2010]_15 2q32.1 93043 Deletion (hemizygous) Maternal
CNV_Elia[2010]_16 2q34 170499 Duplication Maternal
CNV_Elia[2010]_17 2q32.1 76323 Deletion (hemizygous) Maternal
CNV_Elia[2010]_18 2p23.1 38830 Deletion (hemizygous) Paternal EHD3
CNV_Elia[2010]_19 2q32.1 391252 Deletion (hemizygous) Maternal FSIP2
CNV_Elia[2010]_20 2q22.1 65334 Deletion (hemizygous) Maternal
CNV_Elia[2010]_21 2p16.3 61549 Deletion (hemizygous) Paternal
CNV_Elia[2010]_22 2q22.3 111334 Deletion (hemizygous) Maternal
CNV_Lesch[2011]_9 2p25.3 280000 Duplication Maternal (healthy) SNTG2 TMEM18
CNV_Williams[2010]_5 2p22.3 684866 Gain BIRC6 LTBP1 TTC27
CNV_Williams[2010]_12 2q23.3-2q24.1 766494 Gain Paternal DNAJA1P2 GALNT13 RPL23AP29 RPRM
CNV_Williams[2010]_57 2q11.2 684637 Gain CHST10 LOC643896 LONRF2 NMS NPAS2 PDCL3
CNV_Elia[2012]_11 2p12 26786 Dup 1:0:1(50%) CTNNA2
CNV_Jarick[2012]_3 2p24.3 549042 dup NCRNA00276
CNV_Jarick[2012]_4 2p12 1306771 dup CTNNA2 CYCSP6 MIR4264 REG1A REG1B REG1P REG3A REG3G
CNV_Jarick[2012]_5 2q21.1 752509 dup ARHGEF4 CYCSP8 FAM123C FAM168B GNAQP1 GPR148 MZT2A NEK2P4 NF1P8 PLEKHB2 POTEE RHOQP2 TRNAQ36P TRNAS31P TUBA3D

Gene (count: 261)

Literature-origin genes (count: 23)

Genes from other sources Help(count: 238)


Region (count: 9)
Region Name Location No. of Studies (postive/negative/trend)
2p25.1 chr2:7100000-12200000 2 (1/0/1)
2p25.2 chr2:4400000-7100000 1 (0/0/1)
2q14 chr2:114400000-129900000 1 (0/1/0)
2q14.3 chr2:122400000-129900000 1 (0/0/1)
2q21.1 chr2:129900000-132500000 1 (1/0/0)
2q24 chr2:154900000-169700000 1 (0/1/0)
2q35 chr2:215300000-221500000 1 (1/0/0)
Chr2:181.5cM chr2:0-0 1 (0/1/0)
Chr2:34.5cM chr2:0-0 1 (0/1/0)

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Region: chr2:0..243199373    View in gBrowse
(The coordinate of the CNV has been transformed to NCBI Build 37 (hg19) in gBrowse)
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Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014