ADHDgene Database

SNP Report

Basic Info

Name	rs734252 dbSNP Ensembl
Location	Chr15:91446472(Fwd)
Variant Alleles	T/C
Ancestral Allele	C
Functional Annotation	5_prime_UTR_variant; NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant.
Consequence to Transcript	5_prime_UTR_variant(ENST00000559717; ENST00000558853; ENST00000558290) NMD_transcript_variant(ENST00000560451; ENST00000558161) intron_variant(ENST00000559999; ENST00000560451; ENST00000558161) nc_transcript_variant(ENST00000560534) non_coding_exon_variant(ENST00000560534) upstream_gene_variant(ENST00000360468; ENST00000558640; ENST00000561046; ENST00000559132; ENST00000560192; ENST00000557865; ENST00000559965; ENST00000431652; ENST00000560616)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
MAN2A2	mannosidase, alpha, class 2A, member 2	15q25	1(0/0/1)

SNPs in LD with rs734252 (count: 1) View in gBrowse (chr15:91446472..91450441 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2677744	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(0/0/1)	1.0[ASW]; 0.954[CEU]; 1.0[GIH]; 0.888[LWK]; 0.905[MEX]; 0.83[MKK]; 0.854[TSI]; 1.0[YRI]