ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs640401 dbSNP Ensembl
Location Chr18:56966832(Fwd)
Variant Alleles C/T
Ancestral Allele T
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000299721; ENST00000587244)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Sanchez-Mora, C., 2012 P-value=0.008, Genotype12+22 vs11: P-value=0.028, OR(95%CI)=...... P-value=0.008, Genotype12+22 vs11: P-value=0.028, OR(95%CI)=1.30(1.03¨C1.64); Genotypes22 vs11+12: P-value=0.36, OR(95%CI)=1.28(0.75¨C2.17); allelic P-value=0,027, OR(95%CI)=1.25(1.02¨C1.54) More... When adults with ADHD were considered, nominal differences w...... When adults with ADHD were considered, nominal differences were found for nine SNPs located in five genes. More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs640401 (count: 3) View in gBrowse (chr18:56966832..56968427 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 3)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014