ADHDgene Database

SNP Report

Basic Info

Name	rs5030949 dbSNP Ensembl
Location	Chr10:71038340(Fwd)
Variant Alleles	C/A
Ancestral Allele	C
Functional Annotation	intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000450646; ENST00000464803; ENST00000480047; ENST00000483077; ENST00000448642; ENST00000476368; ENST00000360289) nc_transcript_variant(ENST00000479594; ENST00000480047; ENST00000464803; ENST00000483077; ENST00000483054; ENST00000476368) non_coding_exon_variant(ENST00000479594; ENST00000483054) upstream_gene_variant(ENST00000421088; ENST00000488644)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
HK1	hexokinase 1	10q22	1(0/1/0)

SNPs in LD with rs5030949 (count: 2) View in gBrowse (chr10:71026510..71038340 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2394538	intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	0.82[ASW]; 0.907[CHB]; 0.976[CHD]; 1.0[GIH]; 0.951[JPT]; 1.0[LWK]; 1.0[MEX]; 1.0[MKK]; 1.0[YRI]
rs906219	downstream_gene_variant; intron_variant; missense_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	1.0[CHB]; 0.928[CHD]; 0.905[GIH]; 0.952[JPT]; 0.957[MEX]; 0.814[MKK]; 1.0[YRI]