ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

SNP Report

Basic Info

Name	rs362204 dbSNP Ensembl
Location	Chr22:19956263(Fwd)
Variant Alleles	-/C
Functional Annotation	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; feature_elongation.
Consequence to Transcript	3_prime_UTR_variant(ENST00000207636; ENST00000449653; ENST00000403710; ENST00000361682; ENST00000406520; ENST00000407537) NMD_transcript_variant(ENST00000207636) downstream_gene_variant(ENST00000263207; ENST00000403184; ENST00000495096; ENST00000585066; ENST00000401994; ENST00000428707; ENST00000406522; ENST00000480792; ENST00000493893; ENST00000412786; ENST00000344269; ENST00000406259) feature_elongation(ENST00000207636; ENST00000449653; ENST00000406520; ENST00000361682; ENST00000403710; ENST00000407537)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Das M, 2011	C/Del		ETDT P-value=0.31, X²(1df)=1.03, RR=1; allelic fr...... ETDT P-value=0.31, X²(1df)=1.03, RR=1; allelic frequencies COCAPHASE P-value=0.84, X²=0.04 for C; ETDT P-value=0.31, X²(1df)=1.03, RR=1.26; allelic frequencies COCAPHASE P-value=0.84, X²=0.04 for Del More...	both case-control and family-based analysis failed to show a...... both case-control and family-based analysis failed to show any significant impact More...	Non-significant

SNP related genes (count: 3)

Literature-origin genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
COMT	catechol-O-methyltransferase	22q11.21	25(5/20/0)
ARVCF	armadillo repeat gene deleted in velocardiofacial syndrome	22q11.21	1(1/0/0)

Genes from other sources (count: 1)

SNPs in LD with rs362204 (count: 0) View in gBrowse (chr22:19956263..19956263 )