ADHDgene Database

SNP Report

Basic Info

Name	rs3088365 dbSNP Ensembl
Location	Chr5:52249226(Fwd)
Variant Alleles	A/G
Ancestral Allele	G
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000282588) downstream_gene_variant(ENST00000504669) intron_variant(ENST00000505701; ENST00000503559) nc_transcript_variant(ENST00000506275; ENST00000505701; ENST00000503559) non_coding_exon_variant(ENST00000506275)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ITGA1	integrin, alpha 1	5q11.1	1(0/1/0)

SNPs in LD with rs3088365 (count: 2) View in gBrowse (chr5:52242033..52249226 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2193968	intron_variant; nc_transcript_variant	1(0/1/0)	1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 0.952[JPT]; 1.0[LWK]; 0.909[MEX]; 1.0[MKK]; 1.0[TSI]; 1.0[YRI]
rs1421927	intron_variant; nc_transcript_variant	1(0/1/0)	0.826[CHB]