ADHDgene Database

SNP Report

Basic Info

Name	rs2447866 dbSNP Ensembl
Location	Chr5:52182593(Fwd)
Variant Alleles	C/G
Ancestral Allele	G
Functional Annotation	downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000509049) intron_variant(ENST00000513737; ENST00000282588) nc_transcript_variant(ENST00000513737) upstream_gene_variant(ENST00000509174)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ITGA1	integrin, alpha 1	5q11.1	1(0/1/0)

SNPs in LD with rs2447866 (count: 1) View in gBrowse (chr5:52179458..52182593 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2456205	downstream_gene_variant; intron_variant; nc_transcript_variant	1(0/1/0)	0.939[CEU]; 1.0[CHB]; 1.0[JPT]