ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2439 dbSNP Ensembl
Location Chr15:43891512(Fwd); Chr15:43991328(Fwd)
Variant Alleles T/C
Ancestral Allele C
Functional Annotation 3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000300283; ENST00000441322; ENST00000437534; ENST00000413453; ENST00000434505)
NMD_transcript_variant(ENST00000437534)
downstream_gene_variant(ENST00000413657; ENST00000450086; ENST00000493750; ENST00000448437; ENST00000471703; ENST00000460952; ENST00000440125; ENST00000450892; ENST00000437924; ENST00000453782; ENST00000541030; ENST00000495545; ENST00000449946; ENST00000481666; ENST00000475589; ENST00000417289; ENST00000428650; ENST00000428981; ENST00000498538; ENST00000453733; ENST00000485556; ENST00000457648; ENST00000483604; ENST00000415044; ENST00000411750; ENST00000509801; ENST00000479938)
intron_variant(ENST00000396923; ENST00000541030)
upstream_gene_variant(ENST00000410466; ENST00000411560; ENST00000364266)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 5)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 5)


SNPs in LD with rs2439 (count: 1) View in gBrowse (chr15; 15:43779686..43891512 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014