ADHDgene Database

SNP Report

Basic Info

Name	rs2002064 dbSNP Ensembl
Location	Chr11:71163420(Fwd)
Variant Alleles	A/G
Ancestral Allele	A
Functional Annotation	downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000529369) intron_variant(ENST00000527452) upstream_gene_variant(ENST00000524709; ENST00000527316; ENST00000527538; ENST00000524949; ENST00000525346; ENST00000526780; ENST00000524694; ENST00000525200; ENST00000533769; ENST00000534634; ENST00000319023; ENST00000525245; ENST00000407721; ENST00000355527; ENST00000528509; ENST00000529120; ENST00000531364; ENST00000533612; ENST00000529990)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
DHCR7	7-dehydrocholesterol reductase	11q13.4	1(0/0/1)
NADSYN1	NAD synthetase 1	11q13.4	1(0/0/1)

SNPs in LD with rs2002064 (count: 8) View in gBrowse (chr11:71150520..71171003 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs736894	downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/0/1)	0.89[CEU]; 0.908[CHB]; 0.976[CHD]; 0.956[GIH]; 0.953[JPT]; 0.965[TSI]
rs1790324	downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/0/1)	0.89[CEU]; 0.908[CHB]; 0.976[CHD]; 0.956[GIH]; 0.909[JPT]; 0.801[MEX]; 0.965[TSI]
rs7928249	intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/0/1)	0.847[TSI]
rs1630498	downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/0/1)	0.936[ASW]; 0.89[CEU]; 0.952[CHB]; 1.0[CHD]; 0.977[GIH]; 0.953[JPT]; 0.977[LWK]; 0.972[MKK]; 0.965[TSI]; 1.0[YRI]
rs12422045	downstream_gene_variant; intron_variant; upstream_gene_variant	1(0/0/1)	0.811[TSI]
rs3750997	5_prime_UTR_variant; intron_variant; upstream_gene_variant	1(0/0/1)	0.839[TSI]
rs12800438	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant	1(0/0/1)	0.82[TSI]
rs11603330	downstream_gene_variant; intron_variant; upstream_gene_variant	1(0/0/1)	0.811[TSI]