ADHDgene Database

SNP Report

Basic Info

Name	rs1894400 dbSNP Ensembl
Location	Chr15:91428955(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000470152; ENST00000464684) downstream_gene_variant(ENST00000268171; ENST00000416779; ENST00000558794; ENST00000443697; ENST00000481665) intron_variant(ENST00000452243; ENST00000559355; ENST00000444422; ENST00000414248; ENST00000450438; ENST00000394300; ENST00000328850; ENST00000394302; ENST00000470152; ENST00000497945; ENST00000464684) nc_transcript_variant(ENST00000497945) upstream_gene_variant(ENST00000496379; ENST00000561165; ENST00000494259; ENST00000448367; ENST00000462476)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
FURIN	furin (paired basic amino acid cleaving enzyme)	15q26.1	1(0/0/1)

Approved Symbol	Approved Name	Location
FES	feline sarcoma oncogene	15q25-qter

SNPs in LD with rs1894400 (count: 1) View in gBrowse (chr15:91420973..91428955 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs1573643	downstream_gene_variant; intron_variant; upstream_gene_variant	1(0/0/1)	0.959[CEU]; 1.0[CHB]; 1.0[CHD]; 0.912[GIH]; 0.877[JPT]; 0.865[MEX]; 0.901[TSI]