ADHDgene Database
  • Hot Results
  • Quick Search
Keyword:
Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs17238262 dbSNP Ensembl
Location Chr15:55638087(Fwd)
Variant Alleles G/T
Ancestral Allele G
Functional Annotation NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000565367; ENST00000565502)
intron_variant(ENST00000565367; ENST00000164305; ENST00000565502; ENST00000565402; ENST00000563294; ENST00000564663; ENST00000539642)
nc_transcript_variant(ENST00000565402; ENST00000563294)
upstream_gene_variant(ENST00000563742; ENST00000569823)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 2)


SNPs in LD with rs17238262 (count: 1) View in gBrowse (chr15:55638087..55790530 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014