ADHDgene Database

SNP Report

Basic Info

Name	rs1519480 dbSNP Ensembl
Location	Chr11:27675712(Fwd)
Variant Alleles	C/T
Ancestral Allele	T
Functional Annotation	downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000439476; ENST00000395986; ENST00000525528; ENST00000533131; ENST00000395978; ENST00000418212; ENST00000525950; ENST00000395981; ENST00000438929; ENST00000530861; ENST00000584049; ENST00000356660; ENST00000532997; ENST00000530786; ENST00000533246; ENST00000395983; ENST00000528035; ENST00000420794; ENST00000395980; ENST00000314915) intron_variant(ENST00000500662; ENST00000499008; ENST00000502161; ENST00000532965; ENST00000530313; ENST00000501176; ENST00000499568; ENST00000530686) nc_transcript_variant(ENST00000500662; ENST00000499008; ENST00000502161; ENST00000532965; ENST00000530313; ENST00000499568; ENST00000501176; ENST00000530686)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
BDNF	brain-derived neurotrophic factor	11p14.1	14(8/6/0)

Approved Symbol	Approved Name	Location
BDNF-AS1	BDNF antisense RNA 1 (non-protein coding)	11p14.1

SNPs in LD with rs1519480 (count: 2) View in gBrowse (chr11:27665543..27680744 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs11030096	intron_variant; nc_transcript_variant	1(1/0/0)	1.0[YRI]
rs11030101	5_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(1/0/0)	1.0[YRI]