ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs12292490 dbSNP Ensembl
Location Chr11:18022692(Fwd)
Variant Alleles G/T
Ancestral Allele G
Functional Annotation NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000527494; ENST00000525422; ENST00000530925; ENST00000533328; ENST00000524716)
intron_variant(ENST00000527494; ENST00000525422; ENST00000265965; ENST00000528200; ENST00000532389; ENST00000525920; ENST00000530925; ENST00000532212; ENST00000533328; ENST00000532265; ENST00000530613; ENST00000525523; ENST00000529728; ENST00000524716)
nc_transcript_variant(ENST00000532212; ENST00000525523)
upstream_gene_variant(ENST00000529151)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 1)


SNPs in LD with rs12292490 (count: 2) View in gBrowse (chr11:18022692..18059292 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 2)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014