Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_01-29-02_Plate002_Q129
Chromosome 20
Start 1685613
End 1687852
Length 2239
CpG number 11
GC number 888
Per GC 0.4
Obsexp 0.12
Related clones Brain_McrBC_01-29-02_Plate002_Q129
 
Overlapping Gene
Gene Symbol SIRPA
Gene Alias BIT, CD172A, MFR, MYD-1, P84, PTPNS1, SHPS-1, SHPS1, SIRP, SIRP-ALPHA-1, SIRPA, SIRPALPHA, SIRPALPHA2
Ensembl ID ENSG00000198053
Details See Detail
 
Gene Symbol SIRPG
Gene Alias BA77C3.1, CD172G, SIRP-B2, SIRPB2, SIRPG, SIRPGAMMA
Ensembl ID ENSG00000089012
Details See Detail
 
Overlapping Repeat
Repeat name AluSx
Repeat class/family SINE/Alu
 
Repeat name L1MD2
Repeat class/family LINE/L1