Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH_12_B08
Chromosome 20
Start 52846842
End 52850814
Length 3972
CpG number 14
GC number 1465
Per GC 0.37
Obsexp 0.1
Related clones Brain_McrBC_05-16-03_BRMCH_12_B08
 
Overlapping Gene
Gene Symbol CYP24A1
Gene Alias CP24, CYP24, CYP24A1, MGC126273, MGC126274, P450-CC24
Ensembl ID ENSG00000019186
Details See Detail
 
Ensembl ID ENSG00000185834
Details See Detail
 
Overlapping Repeat
Repeat name MER5B
Repeat class/family DNA/MER1_type
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name L1PA10
Repeat class/family LINE/L1
 
Repeat name L1P3
Repeat class/family LINE/L1
 
Repeat name AluSx
Repeat class/family SINE/Alu
 
Repeat name THE1D
Repeat class/family LTR/MaLR
 
Repeat name L1MEc
Repeat class/family LINE/L1
 
Repeat name MER5A1
Repeat class/family DNA/MER1_type
 
Repeat name L1MEc
Repeat class/family LINE/L1