Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH_29_G10
Chromosome 16
Start 17919278
End 17923054
Length 3776
CpG number 11
GC number 1339
Per GC 0.35
Obsexp 0.09
Related clones Brain_McrBC_05-16-03_BRMCH_29_G10
 
Overlapping Gene
Ensembl ID ENSG00000206927
Details See Detail
 
Gene Symbol XYLT1
Gene Alias XT-I, XT1, XYLT1
Ensembl ID ENSG00000103489
Details See Detail
 
Overlapping Repeat
Repeat name L1MA8
Repeat class/family LINE/L1
 
Repeat name L1M5
Repeat class/family LINE/L1
 
Repeat name L1ME2
Repeat class/family LINE/L1
 
Repeat name MLT1H
Repeat class/family LTR/MaLR
 
Repeat name L1MA8
Repeat class/family LINE/L1
 
Repeat name L1MA8
Repeat class/family LINE/L1
 
Repeat name (CA)n
Repeat class/family Simple_repeat
 
Repeat name (GA)n
Repeat class/family Simple_repeat
 
Repeat name L1MCc
Repeat class/family LINE/L1
 
Repeat name MLT1B
Repeat class/family LTR/MaLR