Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH2_9_A09
Chromosome 16
Start 51578688
End 51582050
Length 3362
CpG number 14
GC number 1312
Per GC 0.39
Obsexp 0.11
Related clones Brain_McrBC_05-16-03_BRMCH2_9_A09
 
Overlapping Gene
Gene Symbol TNRC9
Ensembl ID ENSG00000103460
Details See Detail
 
Gene Symbol CHD9
Gene Alias AD013, CHD9, CREMM, KISH2, PRIC320
Ensembl ID ENSG00000177200
Details See Detail
 
Overlapping Repeat
Repeat name L1PREC2
Repeat class/family LINE/L1
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name AluJo
Repeat class/family SINE/Alu
 
Repeat name MLT1L
Repeat class/family LTR/MaLR
 
Repeat name AluY
Repeat class/family SINE/Alu
 
Repeat name L3
Repeat class/family LINE/CR1
 
Repeat name L1PREC2
Repeat class/family LINE/L1