Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH2_7_D02
Chromosome 5
Start 153741230
End 153743945
Length 2715
CpG number 15
GC number 1255
Per GC 0.46
Obsexp 0.1
Related clones Brain_McrBC_05-16-03_BRMCH2_7_D02
 
Overlapping Gene
Gene Symbol GALNT10
Gene Alias DKFZP586H0623, FLJ00205, FLJ11715, GALNACT10, GALNT10, PP-GALNAC-T10
Ensembl ID ENSG00000164574
Details See Detail
 
Overlapping Repeat
Repeat name MER5B
Repeat class/family DNA/MER1_type
 
Repeat name MIR3
Repeat class/family SINE/MIR
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MLT1D
Repeat class/family LTR/MaLR
 
Repeat name THE1C
Repeat class/family LTR/MaLR
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MIRm
Repeat class/family SINE/MIR
 
Repeat name MIRb
Repeat class/family SINE/MIR