Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_01-29-02_Plate003_Q254
Chromosome 6
Start 39557781
End 39562161
Length 4380
CpG number 20
GC number 1900
Per GC 0.43
Obsexp 0.1
Related clones Brain_McrBC_01-29-02_Plate003_Q254
 
Overlapping Gene
Gene Symbol KIF6
Gene Alias C6ORF102, DJ1043E3.1, DJ137F1.4, DJ188D3.1, DKFZP451I2418, KIF6, MGC33317
Ensembl ID ENSG00000164627
Details See Detail
 
Overlapping Repeat
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name MLT1H1
Repeat class/family LTR/MaLR
 
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name (CA)n
Repeat class/family Simple_repeat
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MER117
Repeat class/family DNA/MER1_type