Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH_24_A09
Chromosome 7
Start 42012061
End 42014725
Length 2664
CpG number 15
GC number 1109
Per GC 0.42
Obsexp 0.13
Related clones Brain_McrBC_05-16-03_BRMCH_24_A09
 
Overlapping Gene
Gene Symbol GLI3
Gene Alias ACLS, GCPS, GLI3, PAP-A, PAPA, PAPA1, PAPB, PHS, PPDIV
Ensembl ID ENSG00000106571
Details See Detail
 
Overlapping Repeat
Repeat name A-rich
Repeat class/family Low_complexity
 
Repeat name MER115
Repeat class/family DNA/Tip100
 
Repeat name FAM
Repeat class/family SINE/Alu
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name L3
Repeat class/family LINE/CR1