Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH_11_D01
Chromosome 7
Start 57292882
End 57297615
Length 4733
CpG number 43
GC number 2186
Per GC 0.46
Obsexp 0.17
Related clones Brain_McrBC_05-16-03_BRMCH_11_D01
 
Overlapping Gene
Ensembl ID ENSG00000200722
Details See Detail
 
Overlapping Repeat
Repeat name D20S16
Repeat class/family Satellite
 
Repeat name MSTB
Repeat class/family LTR/MaLR
 
Repeat name MLT1J
Repeat class/family LTR/MaLR
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MLT1J
Repeat class/family LTR/MaLR
 
Repeat name MER81
Repeat class/family DNA/AcHobo
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name L1M5
Repeat class/family LINE/L1
 
Repeat name AluSx
Repeat class/family SINE/Alu
 
Repeat name MLT1J
Repeat class/family LTR/MaLR
 
Repeat name MLT1J
Repeat class/family LTR/MaLR
 
Repeat name MLT2B4
Repeat class/family LTR/ERVL
 
Repeat name AluSx
Repeat class/family SINE/Alu
 
Repeat name MER81
Repeat class/family DNA/AcHobo
 
Repeat name D20S16
Repeat class/family Satellite