Methylation Report

Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
Method        Paired end sequencing, enzyme digestion and analysis
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH_15_F02
Chromosome 20
Start 52565443
End 52568199
Length 2756
CpG number 17
GC number 1039
Per GC 0.38
Obsexp 0.17
Related clones Brain_McrBC_05-16-03_BRMCH_15_F02
Overlapping Gene
Gene Symbol DOK5
Gene Alias C20ORF180, DOK5, MGC16926
Ensembl ID ENSG00000101134
Details See Detail
Overlapping Repeat
Repeat name L1PA4
Repeat class/family LINE/L1
Repeat name MIR
Repeat class/family SINE/MIR
Repeat name MLT1A0
Repeat class/family LTR/MaLR
Repeat name MIR
Repeat class/family SINE/MIR
Repeat name MIRb
Repeat class/family SINE/MIR
Repeat name (ATGGTG)n
Repeat class/family Simple_repeat
Repeat name L2
Repeat class/family LINE/L2