Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH_17_E01
Chromosome 8
Start 80397651
End 80400643
Length 2992
CpG number 11
GC number 1066
Per GC 0.36
Obsexp 0.12
Related clones Brain_McrBC_05-16-03_BRMCH_17_E01
 
Overlapping Gene
Gene Symbol STMN2
Gene Alias SCG10, SCGN10, SGC10, STMN2
Ensembl ID ENSG00000104435
Details See Detail
 
Gene Symbol IL7
Gene Alias IL-7, IL7
Ensembl ID ENSG00000104432
Details See Detail
 
Overlapping Repeat
Repeat name T-rich
Repeat class/family Low_complexity
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name LTR16B
Repeat class/family LTR/ERVL
 
Repeat name MER63C
Repeat class/family DNA/AcHobo
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name (TG)n
Repeat class/family Simple_repeat
 
Repeat name MER63C
Repeat class/family DNA/AcHobo