Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusunmethylated
Sequence name Brain_McrBC_05-16-03_BRMCH_15_D06
Chromosome 21
Start 37366003
End 37370966
Length 4963
CpG number 226
GC number 2457
Per GC 0.5
Obsexp 0.74
Related clones Brain_McrBC_05-16-03_BRMCH_15_D06
 
Overlapping Gene
Gene Symbol PIGP
Gene Alias DCRC, DCRC-S, DSCR5, DSRC, PIGP
Ensembl ID ENSG00000185808
Details See Detail
 
Gene Symbol TTC3
Gene Alias DCRR1, DKFZP686M0150, RNF105, TPRDIII, TTC3
Ensembl ID ENSG00000182670
Details See Detail
 
Overlapping Repeat
Repeat name AluSq
Repeat class/family SINE/Alu
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name Charlie2
Repeat class/family DNA/MER1_type
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name (CGG)n
Repeat class/family Simple_repeat
 
Repeat name L1ME3B
Repeat class/family LINE/L1
 
Repeat name L1ME3B
Repeat class/family LINE/L1