Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_19_G07
Chromosome 7
Start 99781035
End 99790510
Length 9475
CpG number 143
GC number 4899
Per GC 0.52
Obsexp 0.23
Related clones Brain_RE_05-16-03_BRRE10_19_G07
 
Overlapping Gene
Ensembl ID ENSG00000121716
Details See Detail
 
Overlapping Repeat
Repeat name LTR49
Repeat class/family LTR/ERV1
 
Repeat name (CTTG)n
Repeat class/family Simple_repeat
 
Repeat name AluJb
Repeat class/family SINE/Alu
 
Repeat name AluY
Repeat class/family SINE/Alu
 
Repeat name AluSp
Repeat class/family SINE/Alu
 
Repeat name AluJb
Repeat class/family SINE/Alu
 
Repeat name MER74A
Repeat class/family LTR/ERVL
 
Repeat name AluSx
Repeat class/family SINE/Alu
 
Repeat name (TG)n
Repeat class/family Simple_repeat
 
Repeat name AluJb
Repeat class/family SINE/Alu
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name FLAM_A
Repeat class/family SINE/Alu
 
Repeat name LTR13
Repeat class/family LTR/ERVK
 
Repeat name MIR
Repeat class/family SINE/MIR