Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE5_7_G08
Chromosome 4
Start 5700390
End 5706429
Length 6039
CpG number 54
GC number 2611
Per GC 0.43
Obsexp 0.19
Related clones Brain_RE_05-16-03_BRRE5_7_G08
 
Overlapping Gene
Gene Symbol EVC2
Gene Alias EVC2, LBN
Ensembl ID ENSG00000173040
Details See Detail
 
Overlapping Repeat
Repeat name (GA)n
Repeat class/family Simple_repeat
 
Repeat name THER1_MD
Repeat class/family SINE/MIR
 
Repeat name L3
Repeat class/family LINE/CR1
 
Repeat name MLT1D
Repeat class/family LTR/MaLR
 
Repeat name (TGGA)n
Repeat class/family Simple_repeat
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MLT1D
Repeat class/family LTR/MaLR
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MLT1C
Repeat class/family LTR/MaLR
 
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name MLT1C
Repeat class/family LTR/MaLR
 
Repeat name L1MC3
Repeat class/family LINE/L1
 
Repeat name MER5A
Repeat class/family DNA/MER1_type
 
Repeat name L3
Repeat class/family LINE/CR1
 
Repeat name L1MA4
Repeat class/family LINE/L1
 
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name (TA)n
Repeat class/family Simple_repeat
 
Repeat name MIRb
Repeat class/family SINE/MIR