Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_14_B01
Chromosome 11
Start 11492099
End 11498928
Length 6829
CpG number 64
GC number 3473
Per GC 0.51
Obsexp 0.15
Related clones Brain_RE_05-16-03_BRRE10_14_B01
 
Overlapping Gene
Gene Symbol GALNTL4
Gene Alias GALNAC-T15, GALNT15, GALNT18, GALNTL4, MGC71806
Ensembl ID ENSG00000110328
Details See Detail
 
Overlapping Repeat
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name MLT1A0
Repeat class/family LTR/MaLR
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MER91A
Repeat class/family DNA/Tip100
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name LTR33
Repeat class/family LTR/ERVL
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name LTR33
Repeat class/family LTR/ERVL
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name LTR16A
Repeat class/family LTR/ERVL
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name AluSx
Repeat class/family SINE/Alu