Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_15_E07
Chromosome 15
Start 52626537
End 52634012
Length 7475
CpG number 37
GC number 2294
Per GC 0.31
Obsexp 0.21
Related clones Brain_RE_05-16-03_BRRE10_15_E07
 
Overlapping Gene
Gene Symbol UNC13C
Gene Alias DKFZP547H074, UNC13C
Ensembl ID ENSG00000137766
Details See Detail
 
Overlapping Repeat
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name (TA)n
Repeat class/family Simple_repeat
 
Repeat name MLT1K
Repeat class/family LTR/MaLR
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MIRm
Repeat class/family SINE/MIR
 
Repeat name (TTATA)n
Repeat class/family Simple_repeat
 
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name (TATAA)n
Repeat class/family Simple_repeat
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name MER91A
Repeat class/family DNA/Tip100
 
Repeat name (TTATA)n
Repeat class/family Simple_repeat
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name AluY
Repeat class/family SINE/Alu
 
Repeat name (TTATA)n
Repeat class/family Simple_repeat