Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRREM_4_B04
Chromosome 11
Start 56807783
End 56812742
Length 4959
CpG number 32
GC number 2358
Per GC 0.48
Obsexp 0.11
Related clones Brain_RE_05-16-03_BRREM_4_B04
 
Overlapping Gene
Gene Symbol AGTRL1
Gene Alias AGTRL1, APJ, FLJ90771, MGC45246
Ensembl ID ENSG00000134817
Details See Detail
 
Gene Symbol P2RX3
Gene Alias MGC129956, P2RX3, P2X3
Ensembl ID ENSG00000109991
Details See Detail
 
Overlapping Repeat
Repeat name MSTB
Repeat class/family LTR/MaLR
 
Repeat name MLT1B
Repeat class/family LTR/MaLR
 
Repeat name L1ME3
Repeat class/family LINE/L1
 
Repeat name AluSg1
Repeat class/family SINE/Alu
 
Repeat name Tigger5b
Repeat class/family DNA/MER2_type
 
Repeat name MLT1G
Repeat class/family LTR/MaLR
 
Repeat name MLT1J2-int
Repeat class/family LTR/MaLR
 
Repeat name MSTB
Repeat class/family LTR/MaLR