Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_17_G07
Chromosome 7
Start 44400145
End 44407350
Length 7205
CpG number 84
GC number 3336
Per GC 0.46
Obsexp 0.22
Related clones Brain_RE_05-16-03_BRRE10_17_G07
 
Overlapping Gene
Gene Symbol NUDCD3
Gene Alias KIAA1068, NUDCD3, NUDCL
Ensembl ID ENSG00000015676
Details See Detail
 
Overlapping Repeat
Repeat name Charlie5
Repeat class/family DNA/MER1_type
 
Repeat name (TG)n
Repeat class/family Simple_repeat
 
Repeat name MLT1C
Repeat class/family LTR/MaLR
 
Repeat name L1MC4
Repeat class/family LINE/L1
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name L1MC2
Repeat class/family LINE/L1
 
Repeat name L1MB5
Repeat class/family LINE/L1
 
Repeat name Charlie5
Repeat class/family DNA/MER1_type
 
Repeat name L1MB5
Repeat class/family LINE/L1
 
Repeat name L1MC4a
Repeat class/family LINE/L1
 
Repeat name L1M5
Repeat class/family LINE/L1