Methylation Report

Sample
Source BIG/UHN
Tissue cell line
Comment from the Sanger Centre, UK.
Reference PMID:8012384
Related methylation Find all methylation related to this sample
 
Experiment
Method        Construct MBD column and sequencing
 
Methylation      Link to MethyView
Methylation type CpG Island type II    Related CGI Prediction       Methylation type introduction
Sequence name CpGICLT009257
Chromosome 9
Start 97372077
End 97372569
Length 493
CpG number 20
GC number 267
Per GC 0.54
Obsexp 0.55
Related clones Clone026616_5
Clone005214
 
Overlapping Gene
Gene Symbol PTCH
Gene Alias PTCH1, BCNS, FLJ26746, FLJ42602, HPE7, NBCCS, PTC, PTC1, PTCH, PTCH1
Ensembl ID ENSG00000185920
Details See Detail
 
Ensembl ID ENSG00000186029
Details See Detail
 
Cancer Related with above Gene
Name Esophageal tumors
Alias "Oesophagus cancer, Oesophagus tumors"
Detail See Detail
 
Name Nervous system tumors: Medulloblastoma
Detail See Detail
 
Name Naevoid basal cell carcinoma syndrome (NBCS)
Alias Gorlin syndrome; Gorlin-Goltz syndrome; Multiple basal cell nevi; odontogenic keratocysts; skeletal anomalies; Fifth phacomatosis; Hydrocephalus; costovertebral dysplasia; sprengel anomaly
Detail See Detail
 
Name Squamous cell cancer
Detail See Detail
 
Name Oral squamous cell carcinoma
Detail See Detail
 
Name Skin: Cutaneous benign fibrous histiocytomas
Detail See Detail
 
Name Colon: Colorectal adenocarcinoma
Detail See Detail
 
Name Bladder: Urothelial carcinomas
Detail See Detail
 
Name Skin Melanoma
Alias "Cutaneous melanoma, Melanoma skin cancer"
Detail See Detail
 
Name Overview of breast tumors
Detail See Detail
 
Name Overview of bone tumors
Detail See Detail
 
Name Mucosa-associated lymphoid tissue (MALT) lymphoma
Detail See Detail