Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_17_F04
Chromosome 4
Start 5744934
End 5753799
Length 8865
CpG number 153
GC number 4300
Per GC 0.49
Obsexp 0.29
Related clones Brain_RE_05-16-03_BRRE10_17_F04
 
Overlapping Gene
Gene Symbol EVC2
Gene Alias EVC2, LBN
Ensembl ID ENSG00000173040
Details See Detail
 
Overlapping Repeat
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name AluYb8
Repeat class/family SINE/Alu
 
Repeat name MLT1C
Repeat class/family LTR/MaLR
 
Repeat name AluSc
Repeat class/family SINE/Alu
 
Repeat name MIR3
Repeat class/family SINE/MIR
 
Repeat name L1MC2
Repeat class/family LINE/L1
 
Repeat name L1M3
Repeat class/family LINE/L1
 
Repeat name L3
Repeat class/family LINE/CR1
 
Repeat name AluSx
Repeat class/family SINE/Alu
 
Repeat name FLAM_C
Repeat class/family SINE/Alu
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MLT1D
Repeat class/family LTR/MaLR
 
Repeat name MLT1D
Repeat class/family LTR/MaLR
 
Repeat name AluY
Repeat class/family SINE/Alu
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name AluJo
Repeat class/family SINE/Alu
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MLT1K
Repeat class/family LTR/MaLR