Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE5_2_C07
Chromosome 6
Start 170405244
End 170411752
Length 6508
CpG number 144
GC number 3110
Per GC 0.48
Obsexp 0.39
Related clones Brain_RE_05-16-03_BRRE5_2_C07
 
Overlapping Gene
Gene Symbol C6orf122
Gene Alias C6ORF122, DJ266L20.5, FLJ31451
Ensembl ID ENSG00000164493
Details See Detail
 
Gene Symbol FAM120B
Gene Alias DJ894D12.1, FAM120B, KIAA0183, KIAA1838, PGCC1
Ensembl ID ENSG00000112584
Details See Detail
 
Overlapping Repeat
Repeat name L1ME4a
Repeat class/family LINE/L1
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name L1ME4a
Repeat class/family LINE/L1
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name AluY
Repeat class/family SINE/Alu
 
Repeat name MER46B
Repeat class/family DNA/MER2_type
 
Repeat name L2
Repeat class/family LINE/L2