Methylation Report

Sample
Name 9008_cpg64h8.rt1a
Source MethDB_12461
Sex male
Comment Sample from CpG island mapping project. Tissue, age and developmental status of donor unknown.
Reference PMID:8012384
Related methylation Find all methylation related to this sample
 
Experiment
Method        Fractionation with methyl-CpG binding domain (MBD) on solid support
 
Methylation      Link to MethyView
Methylation type Methylation content       Methylation type introduction
5mC content
(0 = no methylation, 1 = max. methylation)
0 estimated score
Sequence name MethDB_sequence_5691     Link to MethDB
Chromosome 1
Start 216678779
End 216678845
Length 66
CpG number 4
GC number 38
Per GC 0.5758
Obsexp 0.75
Related clones MethDB_sequence_5691
 
Overlapping Gene
Gene Symbol TGFB2
Gene Alias MGC116892, TGF-BETA2, TGFB2
Ensembl ID ENSG00000092969
Details See Detail
 
Cancer Related with above Gene
Name Skin Melanoma
Alias "Cutaneous melanoma, Melanoma skin cancer"
Detail See Detail
 
Overlapping Repeat
Repeat name AluSg1
Repeat class/family SINE/Alu
 
Repeat name MIR3
Repeat class/family SINE/MIR