Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_16_B09
Chromosome 21
Start 19794310
End 19804004
Length 9694
CpG number 53
GC number 3468
Per GC 0.36
Obsexp 0.17
Related clones Brain_RE_05-16-03_BRRE10_16_B09
 
Overlapping Gene
Gene Symbol PRSS7
Gene Alias ENTK, MGC133046, PRSS7
Ensembl ID ENSG00000154646
Details See Detail
 
Ensembl ID ENSG00000209746
Details See Detail
 
Overlapping Repeat
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name L1MC1
Repeat class/family LINE/L1
 
Repeat name L1MA4
Repeat class/family LINE/L1
 
Repeat name (CA)n
Repeat class/family Simple_repeat
 
Repeat name L1MA4
Repeat class/family LINE/L1
 
Repeat name MSTA
Repeat class/family LTR/MaLR
 
Repeat name (TTTTG)n
Repeat class/family Simple_repeat
 
Repeat name (TG)n
Repeat class/family Simple_repeat
 
Repeat name L1MA4
Repeat class/family LINE/L1
 
Repeat name LTR16A
Repeat class/family LTR/ERVL
 
Repeat name L1M2a
Repeat class/family LINE/L1