Methylation Report

Sample
Name breast tumor 3
Source MethDB_6534
Sex female
Tissue breast
State primary malignant neoplasm
Phenotype tumor - breast tumor - sporadic breast tumor
Reference PMID:9269993
Related methylation Find all methylation related to this sample
 
Experiment
Method        Isoschizomeric digest
 
Methylation      Link to MethyView
Methylation type Methylation content       Methylation type introduction
5mC content
(0 = no methylation, 1 = max. methylation)
0 estimated score
Sequence name MethDB_sequence_106     Link to MethDB
Chromosome 17
Start 38530262
End 38531269
Length 1008
CpG number 50
GC number 551
Per GC 0.5466
Obsexp 0.6818
Related clones MethDB_sequence_106
 
Overlapping Gene
Gene Symbol BRCA1
Gene Alias BRCA1, BRCAI, BRCC1, IRIS, PSCP, RNF53
Ensembl ID ENSG00000012048
Details See Detail
 
Cancer Related with above Gene
Name Ovary: Epithelial tumors
Detail See Detail
 
Name Prostate tumors
Detail See Detail
 
Name Bladder: Urothelial carcinomas
Detail See Detail
 
Name Breast: Secretory Ductal Carcinoma
Alias Secretory Breast Cancer
Detail See Detail
 
Name Overview of ovarian tumors
Detail See Detail
 
Name Overview of breast tumors
Detail See Detail
 
Overlapping Repeat
Repeat name AluSg
Repeat class/family SINE/Alu
 
Repeat name (TTTTG)n
Repeat class/family Simple_repeat