Methylation Report

Sample
Name Mel-A cells
Source MethDB_6568
Tissue skin - Mel-A cells
State culture cells
Phenotype tumor - melanoma
Reference PMID:12095270
Related methylation Find all methylation related to this sample
 
Experiment
Method        Methylation-sensitive single nucleotide primer extension (Ms-SNuPE)
 
Methylation      Link to MethyView
Methylation type Methylation profile       Methylation type introduction
Methylation status
Sequence name MethDB_sequence_109     Link to MethDB
Chromosome 9
Start 21964921
End 21965159
Length 238
CpG number 16
GC number 153
Per GC 0.6429
Obsexp 0.6507
Related clones Related Profile/Pattern
 
Overlapping Gene
Gene Symbol MTAP
Gene Alias C86FUS, MSAP, MTAP
Ensembl ID ENSG00000099810
Details See Detail
 
Gene Symbol CDKN2A
Gene Alias ARF, BA149I2.3, C9ORF53, CDK4I, CDKN2, CDKN2A, CMM2, INK4, INK4A, MLM, MTS1, P14, P14ARF, P16, P16INK4, P16INK4A, P19, TP16
Ensembl ID ENSG00000147889
Details See Detail
 
Cancer Related with above Gene
Name Thyroid: Anaplastic (undifferentiated) carcinoma
Detail See Detail
 
Name Nervous system: Astrocytic tumors
Detail See Detail
 
Name Bladder: Urothelial carcinomas
Detail See Detail
 
Name Bladder: Squamous cell carcinoma
Detail See Detail
 
Name Uterus: Carcinoma of the cervix
Detail See Detail
 
Name Follicular lymphoma (FL)
Detail See Detail
 
Name Bone: Chondrosarcoma
Detail See Detail
 
Name Hodgkin's disease
Detail See Detail
 
Name Kidney: Clear cell renal cell carcinoma
Alias Common renal cell carcinoma
Conventional renal cell carcinoma, Non papillary renal cell carcinoma
Detail See Detail
 
Name Skin: Cutaneous benign fibrous histiocytomas
Detail See Detail
 
Name Colon: Colorectal adenocarcinoma
Detail See Detail
 
Name Uterus: Endometrial carcinoma
Detail See Detail
 
Name Classification of T-Cell disorders
Detail See Detail
 
Name Diffuse large cell lymphoma
Detail See Detail
 
Name Soft tissue tumors: Ewing's tumors
Detail See Detail
 
Name T-lineage acute lymphoblastic leukemia (T-ALL)
Alias T-cell ALL
Detail See Detail
 
Name Head and neck squamous cell carcinoma
Detail See Detail
 
Name Liver: Hepatocellular carcinoma
Detail See Detail
 
Name Dysplastic nevus syndrome (DNS)
Alias familial atypical mole-malignant melanoma syndrome (FAMMM), B-K mole syndrome
Detail See Detail
 
Name Laryngeal squamous cell carcinoma
Detail See Detail
 
Name Lung: Non-small cell carcinoma
Detail See Detail
 
Name Liver adenoma
Alias Hepatocellular adenoma, Liver cell adenoma
Detail See Detail
 
Name Mycosis fungoides/Sezary's syndrome
Detail See Detail
 
Name Melanoma: Malignant melanoma of soft parts
Alias Clear cell sarcoma of soft parts
Detail See Detail
 
Name Nervous system tumors: Medulloblastoma
Detail See Detail
 
Name Testis: Germ cell tumors
Alias Testicular cancer
Detail See Detail
 
Name Lung: small cell cancer
Detail See Detail
 
Name Soft Tissue Tumors: Liposarcoma: Myxoid liposarcoma
Alias Myxoid-round cell liposarcoma
Detail See Detail
 
Name Plasma cell leukemia (PCL)
Detail See Detail
 
Name Nervous system tumors: Meningioma
Detail See Detail
 
Name Oral squamous cell carcinoma
Detail See Detail
 
Name Overview of lung tumors
Detail See Detail
 
Name Nervous system tumors: Neuroblastoma
Detail See Detail
 
Name Overview of ovarian tumors
Detail See Detail
 
Name Mantle cell lymphoma (incomplete)
Detail See Detail
 
Name Ovary: Sex cord-stromal tumors
Detail See Detail
 
Name Overview of breast tumors
Detail See Detail
 
Name Ovary: Germ cell tumors
Detail See Detail
 
Name Overview of uterus tumors
Detail See Detail
 
Name Bone: Osteosarcoma
Detail See Detail
 
Name Mucosa-associated lymphoid tissue (MALT) lymphoma
Detail See Detail
 
Name Overview of soft tissue tumors
Detail See Detail
 
Name Neuroendocrine tumors: Phaeochromocytoma
Alias Catecholamine-secreting paraganglioma, Functional paraganglioma
Detail See Detail
 
Name Ovary: Epithelial tumors
Detail See Detail
 
Name Thyroid: Papillary carcinoma
Detail See Detail
 
Name Small lymphocytic lymphoma
Detail See Detail
 
Name Breast: Secretory Ductal Carcinoma
Alias Secretory Breast Cancer
Detail See Detail
 
Name Kidney: Renal cell carcinoma
Detail See Detail
 
Name Refractory anemia with excess blasts (RAEB)
Alias RAEB-1 and RAEB-2
Detail See Detail
 
Name Soft tissue tumors: Rhabdomyosarcoma
Detail See Detail
 
Name Soft tissue tumors: Synovial sarcoma
Alias t(X;18)(p11.2;q11.2) in synovial sarcoma
Detail See Detail
 
Name Soft Tissue Tumors: Soft Tissue Leiomyosarcoma
Detail See Detail
 
Name Squamous cell cancer
Detail See Detail
 
Name Kidney: Nephroblastoma (Wilms tumor)
Alias Nephroblastoma
Detail See Detail
 
Name Eye: Posterior uveal melanoma
Detail See Detail
 
Name Renal Pelvis and Ureter, Transitional Cell Cancer
Alias Transitional Cell Cancer (Kidney/Ureter)
Detail See Detail
 
Name Esophageal tumors
Alias "Oesophagus cancer, Oesophagus tumors"
Detail See Detail
 
Name Pancreatic tumors
Alias "pancreatic cancer, exocrine cancer, pancreas cancer"
Detail See Detail
 
Name Small Intestine tumors
Alias samll intestine cancer
Detail See Detail
 
Name Gastric (Stomach) tumors
Alias "gastric cancer, stomach cancer"
Detail See Detail
 
Name Prostate tumors
Detail See Detail
 
Name 9p Rearrangements in ALL
Detail See Detail
 
Name Skin Melanoma
Alias "Cutaneous melanoma, Melanoma skin cancer"
Detail See Detail
 
Name Digestive organs: Carcinoma of the gallbladder and extrahepatic bile ducts
Alias "Biliary tract carcinoma, cholangiocarcinoma"
Detail See Detail
 
Name Classification of B-cell non-Hodgkin lymphomas (NHL)
Detail See Detail
 
Name Adult T-cell leukemia/lymphoma (ATLL)
Detail See Detail
 
Name Chronic myelogenous leukaemia (CML)
Detail See Detail
 
Name Classification of acute myeloid leukemias
Detail See Detail
 
Name Burkitt's lymphoma (BL)
Detail See Detail