Methylation Report

Sample
Name BV173
Source MethDB_1009
Sex male
Tissue blood - BV173 cells
State culture cells
Phenotype tumor - chronic myelogenous leukemia
Particular This cell line contains the Philadelphia chromosome; translocation: t(9;22) (q34.11;q11.1).
Reference PMID:10950939
Related methylation Find all methylation related to this sample
 
Experiment
Method        Bisulfite Genomic Sequencing (Subclones)
 
Methylation      Link to MethyView
Methylation type Methylation pattern       Methylation type introduction
Methylation status
Sequence name MethDB_sequence_41     Link to MethDB
Chromosome 9
Start 132700370
End 132700668
Length 300
CpG number 49
GC number 246
Per GC 0.82
Obsexp 1.052
Related clones Related Profile/Pattern
 
Overlapping Gene
Gene Symbol ABL1
Gene Alias ABL, ABL1, BCR/ABL, C-ABL, JTK7, P150, V-ABL
Ensembl ID ENSG00000097007
Details See Detail
 
Cancer Related with above Gene
Name Acute lymphocytic leukemia
Alias ALL
Detail See Detail
 
Name amplified NUP214/ABL1
Detail See Detail
 
Name t(9;22)(q34;q11) in ALL
Detail See Detail
 
Name t(9;12)(q34;p13)
Detail See Detail
 
Name Chronic myelogenous leukaemia (CML)
Detail See Detail
 
Name t(9;14)(q34;q32)
Detail See Detail
 
Name t(9;22)(q34;q11) in CML
Detail See Detail
 
Name Skin Melanoma
Alias "Cutaneous melanoma, Melanoma skin cancer"
Detail See Detail
 
Name t(9;22)(q34;q11) in ANLL
Detail See Detail
 
Name Lung: Non-small cell carcinoma
Detail See Detail
 
Name T-lineage acute lymphoblastic leukemia (T-ALL)
Alias T-cell ALL
Detail See Detail
 
Overlapping Repeat
Repeat name G-rich
Repeat class/family Low_complexity
 
Repeat name (CGGGGG)n
Repeat class/family Simple_repeat
 
Repeat name (CCGGG)n
Repeat class/family Simple_repeat