Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_08-27-02_AM_Plate6_C10
Chromosome 5
Start 180016664
End 180018084
Length 1420
CpG number 37
GC number 617
Per GC 0.43
Obsexp 0.55
Related clones Brain_RE_08-27-02_AM_Plate6_C10
 
Overlapping Gene
Gene Symbol FLT4
Gene Alias FLT4, FLT41, PCL, VEGFR3
Ensembl ID ENSG00000037280
Details See Detail
 
Ensembl ID ENSG00000199892
Details See Detail
 
Cancer Related with above Gene
Name Ovary: Epithelial tumors
Detail See Detail
 
Name Kidney: Clear cell renal cell carcinoma
Alias Common renal cell carcinoma
Conventional renal cell carcinoma, Non papillary renal cell carcinoma
Detail See Detail
 
Name Skin Melanoma
Alias "Cutaneous melanoma, Melanoma skin cancer"
Detail See Detail
 
Overlapping Repeat
Repeat name (CAGAGA)n
Repeat class/family Simple_repeat
 
Repeat name AluSg
Repeat class/family SINE/Alu
 
Repeat name L1P
Repeat class/family LINE/L1
 
Repeat name L1M
Repeat class/family LINE/L1
 
Repeat name L1MB3
Repeat class/family LINE/L1
 
Repeat name Alu
Repeat class/family SINE/Alu
 
Repeat name L1M
Repeat class/family LINE/L1
 
Repeat name AluSg
Repeat class/family SINE/Alu
 
Repeat name L1M
Repeat class/family LINE/L1