Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_14_A12
Chromosome 20
Start 36265400
End 36273643
Length 8243
CpG number 57
GC number 3556
Per GC 0.43
Obsexp 0.15
Related clones Brain_RE_05-16-03_BRRE10_14_A12
 
Overlapping Gene
Ensembl ID ENSG00000149633
Details See Detail
 
Overlapping Repeat
Repeat name L1MB8
Repeat class/family LINE/L1
 
Repeat name LTR16A1
Repeat class/family LTR/ERVL
 
Repeat name (TTTTG)n
Repeat class/family Simple_repeat
 
Repeat name L1MB4
Repeat class/family LINE/L1
 
Repeat name (TTG)n
Repeat class/family Simple_repeat
 
Repeat name L1MB4
Repeat class/family LINE/L1
 
Repeat name L1MB8
Repeat class/family LINE/L1
 
Repeat name L1MB4
Repeat class/family LINE/L1
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name MIR_Mars
Repeat class/family SINE/MIR
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MIRm
Repeat class/family SINE/MIR
 
Repeat name MIR3
Repeat class/family SINE/MIR
 
Repeat name AluY
Repeat class/family SINE/Alu
 
Repeat name AluY
Repeat class/family SINE/Alu
 
Repeat name L2
Repeat class/family LINE/L2
 
Repeat name MER117
Repeat class/family DNA/MER1_type
 
Repeat name AluY
Repeat class/family SINE/Alu