Methylation Report

Sample
Source Columbia University
Tissue brain-cerebral cortex and cerebellum
Environment from a full-term human brain
Comment From the tissue bank of the Herbert Irving Comprehensive Cancer Center
Reference PMID:16365381
Related methylation Find all methylation related to this sample
 
Experiment
Method        Paired end sequencing, enzyme digestion and analysis
 
Methylation      Link to MethyView
Methylation type Methylation region       Methylation type introduction
Methylation statusmethylated
Sequence name Brain_RE_05-16-03_BRRE10_14_G06
Chromosome 11
Start 99528383
End 99537696
Length 9313
CpG number 49
GC number 3208
Per GC 0.34
Obsexp 0.18
Related clones Brain_RE_05-16-03_BRRE10_14_G06
 
Overlapping Gene
Gene Symbol CNTN5
Gene Alias CNTN5, HNB-2S, MGC163491, NB-2
Ensembl ID ENSG00000149972
Details See Detail
 
Overlapping Repeat
Repeat name MIR
Repeat class/family SINE/MIR
 
Repeat name L1ME3B
Repeat class/family LINE/L1
 
Repeat name MIRb
Repeat class/family SINE/MIR
 
Repeat name L1PA7
Repeat class/family LINE/L1
 
Repeat name L1ME3B
Repeat class/family LINE/L1
 
Repeat name L1ME3B
Repeat class/family LINE/L1
 
Repeat name L1PA3
Repeat class/family LINE/L1
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name AT_rich
Repeat class/family Low_complexity
 
Repeat name L1ME3B
Repeat class/family LINE/L1
 
Repeat name L1MA8
Repeat class/family LINE/L1